In Silico Study of the Antibacterial Activity of Acalypha indica L. Compounds Against Staphylococcus aureus DNA Gyrase Protein

Lisa Savitri, Kharisul Ihsan, Elfred Rinaldo Kasimo

Abstract


Flavonoids from Acalypha indica exhibit potential antibacterial activity against Staphylococcus aureus, particularly through inhibition of DNA gyrase B. This study evaluated molecular interactions of mauritanin, acalyphin, quercetin, and kaempferol using in silico approaches, including molecular docking, molecular dynamics simulation, and ADMET prediction. Docking results showed that mauritanin had the lowest binding energy (-8.5 kcal/mol) and formed stable interactions with key residues in the active site, corroborated by 50 ns molecular dynamics simulations. Pharmacokinetic and drug-likeness predictions indicated that mauritanin and acalyphin had favorable profiles, with high gastrointestinal absorption and low toxicity risk. The other flavonoids showed higher permeability across the central nervous system, potentially beneficial for CNS-targeted therapies. These findings support mauritanin as a promising lead compound for novel antibacterial agent development, warranting further in vitro and in vivo validation.


Keywords


Acalypha indica; flavonoid; Staphylococcus aureus; DNA gyrase B; molecular docking; ADMET

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DOI: https://doi.org/10.14421/biomedich.2026.151.137-141

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Copyright (c) 2026 Lisa Savitri, Kharisul Ihsan, Elfred Rinaldo Kasimo



Biology, Medicine, & Natural Product Chemistry
ISSN 2089-6514 (paper) - ISSN 2540-9328 (online)
Published by Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity.

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