Biology, Medicine, & Natural Product Chemistry
Biology, Medicine, & Natural Product Chemistry is an open access, peer-reviewed journal, published to attract and disseminate innovative and expert findings in the fields of plant, animal, and microorganism secondary metabolite, and also the effect of natural product on biological system as a reference source for researchers in these fields, and with the aim to set international standards in their methodology. Biology, Medicine, & Natural Product Chemistry is published twice a year, in April and October. Starting from Volume 10 Number 1 2021, all manuscripts will be published online as soon as the revision is approved (no time constraints). This journal is published by the Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity. Scientific feedback (short communication) is only received for manuscript, which criticize published article before. Manuscripts will be reviewed by managing editor and invited peer review according to their disciplines. The only articles written in English (U.S. English) are accepted for publication. Communications can be addressed to the Support Contact for accelerating evaluation. A letter of statement expressing that the author(s) is responsible for the original content of manuscript, the result for author(s)'s research and never been published must be attached.
Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity
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Evaluation of Selected Pharmacological Properties of a Polyherbal Extract (Aju Mbaise) in Experimental Rats
Aju Mbaise, an herbal combination widely utilized in southeastern Nigeria for managing postpartum complications and alleviating menstrual pain, was evaluated for analgesic, anti-inflammatory, and anti-diarrheal properties in rats. Specific objectives included evaluating anti-diarrheal effects, examining anti-inflammatory effects and assessing analgesic properties of the herbal combination. The study involved subjecting the Aju Mbaise polyherbal extract (APE) to phytochemical analysis and acute toxicity testing. Anti-diarrheal effects were evaluated by administering charcoal as a meal and using castor oil-induced models. Anti-inflammatory effects were assessed through the carrageenan-induced paw oedema model, and analgesic properties were examined using the acetic acid-induced pain model. Phytochemical analysis identified alkaloids, tannins, phenols, steroids, cardiac glycosides, terpenoids, flavonoids, and saponins in the extract. The acute toxicity value exceeded 5000 mg/kg body weight, indicating safety. In animal studies, APE exhibited significant inhibitory effects on intestinal motility, reduced wet stool frequency, and influenced the castor oil-induced diarrhoea and enhanced anti-inflammatory activities. Additionally, it demonstrated a reduction in acetic acid-induced pain in rats. The APE with its diverse phytochemical composition, possesses anti-diarrheal, anti-inflammatory, and analgesic properties. However, further research is needed to establish ideal dosages and potential adverse effects.
Copyright (c) 2025 Robert Ikechukwu Uroko, Nnah Solomon Ijioma, Henry Nnaemeka Ogbonna, Nancy Oluomachi Uchenna
Physicochemical Characterization and Dissolution Enhancement of Mefenamic Acid–Isonicotinamide Crystalline Solid Dispersion
Poor aqueous solubility limits the bioavailability of non-steroidal anti-inflammatory drugs like mefenamic acid. This study aims to improve the solubility and dissolution of mefenamic acid through crystalline solid dispersions using solvent evaporation and co-grinding techniques with selected co-formers. Solid dispersions were formulated at different drug-to-co-former ratios (1:1, 1:2, and 2:1) and characterized using differential scanning calorimetry, Fourier-transform infrared spectroscopy, and powder X-ray diffraction. DSC results revealed reduced crystallinity, indicated by the disappearance of melting peaks and the appearance of a single glass transition temperature. FTIR analysis confirmed hydrogen bonding between the drug and co-former, while PXRD patterns showed a loss of long-range order, supporting the formation of amorphous phases. Dissolution testing demonstrated a significant increase in drug release, particularly in the 1:2 formulation, which outperformed the pure drug and other ratios. These results confirm that the choice of preparation method and co-former ratio critically influence the performance of solid dispersions. This study provides valuable insights into the design of improved oral formulations for poorly soluble drugs, contributing to the advancement of pharmaceutical technology
Copyright (c) 2025 Indra, Nurul Apriani, Ade Yeni Aprillia, Winda Trisna Wulandari, Gatut Ari Wardani, Firman Gustaman
Cytogenotoxicity Test and Biological Evaluation of Curculigo latifolia Extract with Bioindicators Allium cepa L. var. aggregate
Curculigo latifolia plants have secondary metabolites that can suppress cell division. Compounds that suppress cell division can be used as anticancer drug candidates. This research aims to determine the effect of C. latifolia root extract on cell division and genotoxic effects using bioindicator A. cepa L. var. aggregatum. This study was conducted experimentally with a completely randomized design (CRD) using 6 treatment levels and 5 replications. The treatment levels in this study were K (water), K + (H2O2 300 Mm), K - (H2O2 26 hours + water 46 hours) and a combination of treatments at P1, P2, and P3 with H2O2 immersion (26 hours) and continued immersion of C. latifolia root extract concentrations of 400 µg mL-1, 600 µg mL-1 and 800 µg mL-1 (46 hours). The roots of A. cepa from the soaking treatment of C. latifolia extract were used to make preparations using the squash method. The results of the ANOVA test showed that the administration of C. latifolia root extract had a significant effect on the mitotic index and cell abnormalities (P<0.05). P1 had the most effective value in reducing the mitotic index and cell chromosome abnormalities.
Copyright (c) 2025 Susan Susanti, Nelis Hernahadini, Subagio Joko Suprapto, Haryanto Haryanto
The Acoustic Material Constructed by the Fiber of Eichhornia crassipes and Banana Peel as a Sound Pollutant-reducing Solution
This study aims to evaluate and compare the effect of the composition of water hyacinth (Eichhornia crassipes) with a banana peel on the absorption coefficient value as a composite material for absorbing sound waves. The cellulose within the water hyacinth and banana peel lead to reduced overload sound waves. This study used an experimental method providing banana peel crushed into powder, water hyacinth fiber, and resin (as a catalyst). All samples were prepared with dimensions of 13.5 cm × 25 cm × 0.8 cm. A frequency generator application was used as the sound source (125, 250, 500, 1000, and 2000 Hz), while a sound meter application measured sound intensity (dB). The results indicated that the outer surface of sample D had a superior absorption coefficient, measuring 0.51 at 250 Hz and 0.45 at 2000 Hz. Meanwhile, the inner surface of sample D recorded absorption coefficients of 0.46 at 250 Hz and 0.45 at 2000 Hz. Variations in absorption values were attributed to destructive interference and saturation. Sample D contained more water hyacinth (approximately 30%) than banana peel powder. This suggests that water hyacinth and banana peel powder are viable natural fiber alternatives for sound wave absorption.
Copyright (c) 2025 Regita Dimar Asyurra, Avivah Afra Amatullah, Annisa Zaskia Putri, Mayshilla Anatayya Putri Zevly, Angga Puja Asiandu, Widya Sari
Macroscopic, Microscopic, and Phytochemical Screening Analysis of Medicinal Plants in Nagari Lasi, West Sumatra
Indonesia is one of the countries titled “Megabiodiversity”, which has a high level of biodiversity, including medicinal plants. Medicinal plants utilize various parts of plants, such as roots, leaves, stems, and fruits for prevention, treatment, and pain relief. Nagari Lasi has great potential in the diversity of medicinal plants, but their utilization by the community is still limited due to a lack of knowledge. This study aims to identify the content of bioactive compounds in medicinal plants through macroscopic, microscopic, and phytochemical screening. The methods include organoleptic observation, macroscopic and microscopic analysis, and phytochemical tests. Of the 150 plant samples, the results showed that 78 samples contained alkaloids, 115 samples contained phenolics, 129 samples contained flavonoids, 75 samples contained steroids, 21 samples contained triterpenoids, and 119 samples contained saponins. This study provides basic information regarding the phytochemical content of medicinal plants in Nagari Lasi as a first step in developing traditional medicine.
Copyright (c) 2025 Tika Afriani, Devahimer Harsep Rosi, Winda Mailinda
Antimicrobial Properties of Endophytic Fungal Culture Filtrates from Tinospora crispa
Endophytic fungi can produce bioactive compounds that are useful as antimicrobials. This study evaluates the antimicrobial potential of culture filtrate extracts derived from endophytic fungi isolated from the medicinal plant Tinospora crispa. Isolation was carried out from the roots, leaves, and stems of T. crispa, which were then identified based on the ITS gene. The culture filtrate was extracted using ethyl acetate and assessed for antimicrobial activity using the disc diffusion method against Escherichia coli, Staphylococcus aureus, and Candida albicans. A total of 3 endophytic fungal isolates were isolated and identified as Acrocalymma vagum, Diaporthe tulliensis, and Colletotrichum truncatum. The results showed that all culture filtrate extracts of the fungal endophyte isolates exhibited varying antimicrobial activity, with the highest antibacterial activity demonstrated by C. truncatum isolates against Escherichia coli and Staphylococcus aureus. The most significant anticandida activity was by D. tulliensis isolates. Endophytic fungi of medicinal plant T. crispa can be developed as a source of antimicrobial agents, especially to overcome the increasing antibiotics resistance.
Copyright (c) 2025 Oktira Roka Aji, Karomah Indah Fitria, Naresh Wari Mega Vianingtyas, Adelyanty Pangestuty Wicaksono
In Vitro Evaluation of the Antibacterial Properties of Lime Mistletoe (Dendrophthoe petandra (L.) Miq.) Extract Against Escherichia coli
The increasing prevalence of antibiotic-resistant bacteria necessitates the exploration of alternative antimicrobial agents derived from natural sources. This study aimed to evaluate the in vitro antibacterial activity of lime mistletoe (Dendrophthoe petandra (L.) Miq.) extract against Escherichia coli ATCC 25922 using the disc diffusion method. Extract concentrations of 20%, 40%, 60%, 80%, and 100% were prepared alongside negative (distilled water) and positive (Cefadroxil) controls. Nutrient Agar (NA) media were inoculated with E. coli and discs impregnated with each concentration were placed on the media, followed by incubation at 37°C for 24 hours. The inhibition zones were measured to assess antibacterial activity. Results demonstrated a concentration-dependent increase in antibacterial efficacy, with inhibition zone diameters ranging from 8.3 mm at 20% extract to 20.3 mm at 100% extract concentration. The highest concentration’s inhibition zone was comparable to that of Cefadroxil (22.5 mm). No inhibition was observed in the negative control. Statistical analysis confirmed significant differences between treatment groups (p < 0.05). The antibacterial activity of lime mistletoe extract is likely due to its bioactive phytochemicals such as flavonoids and phenolics, which are known to disrupt bacterial cell membranes and inhibit microbial growth. These findings suggest that Dendrophthoe petandra extract holds potential as a natural antibacterial agent, providing an alternative to conventional antibiotics amid growing resistance issues. Further studies involving isolation of active compounds, toxicity evaluation, and in vivo testing are recommended to validate its clinical applicability.
Copyright (c) 2025 Lisa Savitri, Juan Vega Mahardika, Novirma Yanti, Syntia Tanu Juwita
Identification of Gamma-Aminobutyricacid (GABA) of Tempeh Made from Koro Kratok (Phaseolus lunatus) Bean and Beluntas (Plunchea indica) Leaves as Glucose Stabilizer
The tempeh available on the market is predominantly made from imported soybeans, but alternative formulations using locally sourced legumes, such as koro kratok (Phaseolus lunatus), have been explored. This study investigates the potential of koro kratok tempeh enriched with Plunchea indica (beluntas) leaves to improve its functionality. The study will evaluate gamma-aminobutyric acid (GABA) levels and physicochemical changes during fermentation. Tempeh was produced using different koro kratok-to-P. indica leaf ratios (100:0, 75:25, and 50:50). Key parameters observed included mycelium development and the content of fat, moisture, ash, protein, carbohydrates, and pH. Adding P. indica increased the fat content by 0.66–2.28%, the moisture content by 68.81–78.42%, and the ash content by 0.36–1.09%. Meanwhile, the protein content ranged from 6.62–8.87%, the carbohydrate content from 12.07–21.31%, and the pH between 4.21–4.25. The inclusion of P. indica also altered the profile of dominant volatile compounds. GABA was detected in all samples, and in vivo studies showed improved blood glucose levels and glucose tolerance in prediabetic rats. These results suggest that koro kratok tempeh enriched with P. indica leaves could be a promising functional food for regulating blood glucose.
Copyright (c) 2025 Istiqomah, Dina Mustika Rini, Larisa Tania, Sholihatil Hidayati, Mohammad Rofik Usman
Proximate Analysis and Chemical Constituents of Psychotria latistipula Benth. (Rubiaceae) Leaves
Psychotria latistipula Benth. (Rubiaceae), a traditional Nigerian medicinal plant recognised for its effectiveness in treating cancer, tumours, bronchial and gastrointestinal disorders was investigated for its chemical constituents by Gas Chromatography-Mass Spectrometry (GC-MS) technique; also, proximate analysis was done to determine the composition of moisture, crude protein, crude fiber, fat, carbohydrate, and ash contents, which had not been previously reported. P. latistipula leaves were extracted by maceration using acetone and hexane (1:1). The proximate analysis indicated that the leaves of P. latistipula contain moisture, crude protein, crude fiber, fat, carbohydrate, and ash contents of 8.91±0.14, 12.43±0.05, 20.78±0.66, 2.28±0.06, 50.34±0.79, and 5.27±0.16%, respectively, demonstrating a notably high carbohydrate content. The GC-MS identified twenty-eight compounds, making up 93.08% of the total. The dominant classes of these compounds included fatty acid esters, saturated fatty acids, fatty acid methyl esters, and unsaturated fatty acid aldehydes accounting for 19.27%, 18.71%, 13.77% and 13.36% of the total, respectively. Octadecanoic acid (14.03%) was the major compound in P. latistipula leaves acetone-hexane extract. Notably, Octadecanoic acid is known for its potential anti-inflammatory, anticancer and antioxidant properties, which indicates P. latistipula could serve as an anti-inflammatory, antioxidant and anticancer agents further justifying its ethnomedicinal use.
Copyright (c) 2025 Samuel Akinniyi Odewo, Olayombo Margaret Banwo
Stability Test and Antioxidant Activity Test of Sheet Mask Preparation of Avocado Peel (Persea americana Mill) Ethanol Extract with DPPH (2,2-Diphenyl-1-Pikrilhydrazil) method
The avocado plant (Persea americana Mill) is known to have various benefits, one of which is in the skin of the fruit which contains flavonoid compounds as antioxidants. This antioxidant compound has the potential to be used as an active ingredient in various cosmetic preparations, one of which is sheet masks. This study aims to determine the physical quality, stability, and antioxidant activity of avocado peel ethanol extract formulated in sheet mask preparation. This study uses a quantitative method with an experimental design, and applies a complete random design (RAL) consisting of three variations of extract concentration, namely 2%, 4%, and 6%. Physical quality evaluation includes organoleptic, homogeneity, pH, adhesion, and viscosity, as well as stability tests using the cycling test method for six cycles. Antioxidant activity was tested using the DPPH method to determine the IC50 value. The results show that all formulas meet good physical quality. The 6% formula has the best stability with a pH of 5.79±0.062, an adhesion of 3.60 ± 0.130 seconds, and a viscosity of 9490.67 ± 27.57 cP. Statistical tests showed no significant changes in pH (p = 0.385), adhesion (p = 0.833), and viscosity (p = 1.000). The antioxidant activity test showed that Sheet mask with a concentration of 6% had an IC50 value of 198.11 ppm and was classified as having weak antioxidant activity, while avocado peel ethanol extract had an IC50 value of 53.11 ppm and was classified as having strong antioxidant activity. So it can be concluded that sheet mask preparations have good physical quality and are stable during storage, but the antioxidant activity of avocado peel extract is higher than sheet mask preparations.
Copyright (c) 2025 Uswatun Khasanah, Yetti Hariningsih, Syamsul Ma'arif, Hery Prambudi
Molecular Method Optimization to Identify Plasmodium falciparum Multidrug Resistance 1 (pfmdr1) gene as a Predictor of Antimalarial Resistance
Several approaches have been designed to control malaria, a disease with high morbidity and mortality, but they face some hurdles. Antimalarial resistance is one of the major challenges for malaria elimination, so the detection of antimalarial resistance is essential. Several molecular markers for antimalarial resistance have been identified, including Plasmodium falciparum multidrug resistance 1 (pfmdr1) gene. This study determined the optimization of molecular techniques to identify the pfmdr1 gene as an antimalarial resistance predictor in Indonesia. The study included patients diagnosed with uncomplicated or severe malaria originating from the health district of Kerom Regency, Papua Province, and Dr. Soebandi Hospital, Jember, East Java Province. Blood samples were collected in the Whatmann filer paper after informed consent. DNA was isolated from dried blood filter paper, and nested PCR was performed using a specific primer, the pfmdr1-A and pfmdr1-B genes. The PCR cycle was optimized based on previous studies. The pfmdr1-A has a similar setting to the earlier study, but the pfmdr1-B had a different optimum setting from the previous study with the annealing temperature of 57oC for nested-1 and 62oC for nested-2. This PCR setting could be used for further examination. The positive results of the amplification indicated the potential for antimalarial resistance in the parasite population. A study on the gene copy number and polymorphism is essential to determine the definitive conclusion on antimalarial resistance.
Copyright (c) 2025 Erma Sulistyaningsih, Rosita Dewi, Sheilla Rachmania, Irawan Fajar Kusuma, Muhammad Rizqi Kholifaturrohmy, Yunita Armiyanti, Sakinatus Sariroh Kholifaturrohmah, Made Prasanti Andriani
Effect of Modified Kimpul Flour Substitution and Glycerol Monostearate Concentration on The Physicochemical and Sensory Properties of Sweet Bread
Wheat flour is the primary ingredient in sweet bread production, yet its import-dependent supply in countries like Indonesia prompts the need for alternative local ingredients. Kimpul tuber (Xanthosoma sagittifolium), rich in carbohydrates, presents a promising substitute, though its native starch properties are less suitable for baking. This study aimed to evaluate the effect of substituting wheat flour with heat moisture treatment (HMT)-modified kimpul flour and the addition of glycerol monostearate (GMS) on the physicochemical and sensory properties of sweet bread. A factorial completely randomized design was applied using three wheat-to-kimpul flour ratios (3:1, 1:1, and 1:3) and three GMS concentrations (2%, 3%, and 4%). Results showed that higher kimpul flour substitution increased moisture and carbohydrate content but reduced protein and fat levels. Textural properties such as hardness and adhesiveness also increased with kimpul content, but these were mitigated by the addition of GMS, particularly at 3%. The optimal formulation 1:1 wheat-to-kimpul ratio with 3% GMS produced sweet bread with the best overall sensory acceptance. The findings suggest that HMT-modified kimpul flour combined with GMS can serve as a functional and acceptable alternative to wheat flour in bread production. This supports food diversification strategies and promotes the utilization of local tuber-based flours in bakery applications.
Copyright (c) 2025 Siti Nurlaela Setianingsih, Rizky Muliani Dwi Ujianti, Iffah Muflihati, Fafa Nurdyansyah, Mega Novita, Diva Julia Paramita, Shindi Nofitasari, Dola Mareta Anggarini, Abdillah Fathan Generus Annajah
Identification of Total Coliform Bacteria in Processed Enbal Food in Several Traditional Markets in Ambon City
Enbal is a traditional food from Maluku, originally from the Kei Islands, made from bitter cassava (Manihot esculenta). This processed food product holds significant historical and cultural value. However, enbal can become a source of illness if not prepared properly, leading to contamination and an increased risk of foodborne diseases. This study aimed to determine the microbiological quality through total plate count (TPC) analysis and bacterial identification of enbal at several traditional markets in Ambon City. It was a descriptive observational study with a true experimental laboratory approach. The TPC results for enbal food samples from Mardika market ranged from 14.5 × 102 CFU/g to 4.85 × 104 CFU/g, Waiheru market ranged from 8.3 × 102 CFU/g to 3.2 × 105 CFU/g, Batu Merah market ranged from 11.0 × 104 to 3.0 × 105 CFU/g, and Passo market ranged from 2.4 × 102 CFU/g to 3.75 × 105 CFU/g. The results of bacterial species identification from the four enbal food samples revealed Klebsiella pneumoniae and Staphylococcus haemolyticus. Thus, it can be concluded that the four enbal samples examined are safe for consumption as they do not exceed the Indonesian National Standard (SNI) 01-2997-1996, which is 1 x 106 CFU/g.
Copyright (c) 2025 Salmin Safril Nahumarury, Melda Yunita, Anggun Lestary Husein, Effendi Effendi
Washed Erythrocyte (WE) Bag Bacteria Brevundimonas vesicularis Identification at the Blood Donor Unit PMI DKI Jakarta
A Packed Red Cell (PRC) component known as a washed erythrocyte (WE) has undergone two to three washings with sterile physiological saline to get rid of 99% of the plasma protein, antibodies, and some leukocytes. The goal of this study was to use Bact/alert media to detect the presence or absence of bacteria (anaerobes or aerobes) in WE blood components because there is a chance that germs from the environment could contaminate WE processing because it is still an open system and the manufacturing is still exposed to the elements. Blood samples come from WE blood products that have undergone quality checks for bacterial contamination in a lab dedicated to product quality. Checking for bacterial contamination in the blood involves utilizing the Bact / Alert tool to examine bacterial contamination. Blood product aerobic (BPA) and blood product anaerobic (BPN) media are used in the culture of blood product sample on Bact/alert. Aside from 1 (2.44%) component sample of WE blood that was identified as bacteria in BPA media, the results of the 41 samples examined in 2020 showed that there was aerobic bacterial contamination in BPA media but no anaerobic bacterial contamination in BPN media. This was confirmed by the examination of samples on BPN media, which yielded negative results in 41 samples (100%) and positive results from none of the 41 samples. The results of identification at the Microbiology Laboratory at the University of Indonesia showed that the aerobic bacteria that contaminated washed erythrocyte (WE) blood products on BPA microbiology media were Brevundimonas vesicularis.
Copyright (c) 2025 Widia Rahmatullah, Rina Oktaviyanti, Resmi Aini, Rudina Azimata R., Reska Handayani
Formulation and Evaluation of Spirulina-Based Gel with Varying Carbopol Concentrations for Anti-Acne Activity against Staphylococcus epidermidis
Spirulina platensis is a blue-green microalga known for its antibacterial properties, offering potential as a natural alternative in acne treatment. Acne vulgaris, often caused by Staphylococcus epidermidis, requires effective topical solutions. Gels are favored for their non-greasy texture, ease of application, and good skin absorption. This study aimed to formulate and evaluate anti-acne gels containing 25% Spirulina extract with varying Carbopol concentrations (0.5%, 1%, 1.5%). Each formulation was assessed for physical properties, stability over 21 days, and antibacterial activity against S. epidermidis. All gel formulations met quality standards for pH, homogeneity, viscosity, spreadability, and adhesiveness. The gel with 0.5% Carbopol (FI) showed the best spreadability, ideal viscosity, and good adhesiveness, along with the highest antibacterial activity, exhibiting an inhibition zone of 16.5 mm—comparable to tetracycline. In conclusion, Spirulina-based gel with 0.5% Carbopol offers an effective, stable, and natural anti-acne option. These findings highlight the potential of Spirulina as a bioactive agent in topical formulations and encourage further research for clinical applications in acne management.
Copyright (c) 2025 Emmellia Yunitha, Anita Nilawati, Mega Novita, Dian Marlina
Antimalaria Potential and Toxicological Evaluation of Synclisia scabrida (Miers) Ex Oliv Methanol Root Extract in Plasmodium berghei-infected Mice Model
Despite the artemisinin-based combination therapy for malaria treatment, it remains a public health concern globally. Therefore, there is an urgent need for novel antimalarial drugs to arrest this perceived threat to global malaria control. This study aims to investigate the antimalarial potential of S. scabrida (SS) and evaluate its possible effect on haematological and biochemical parameters. Malaria was inoculated in mice using Plasmodium berghei. After 72 h, they were orally treated for four days as follows: Group 1: 10 mL/kg % Dimethyl sulphoxide (DMSO); Group 2: 140 mg/kg Artemether/lumefantrine; Groups 3, 4 and 5: 500, 250, 125 mg/kg SS methanolic extract, respectively. SS methanolic extract significantly reduced parasite density and percentage parasitemia (p < 0.05) at all doses used in the study, non-significantly increased haematological, biochemical parameters and distorted liver architecture; when compared to the negative control. SS methanolic extract exhibited good antimalarial activity against Plasmodium berghei. Lower SS dose did not cause significant changes to the lipid profiles. However, the high dose may not be safe since there were some adverse effects shown on the liver and kidney status. Further studies are warranted to determine the effect of the middle and the lowest doses on the liver and kidney.
Copyright (c) 2025 Ogochukwu Ngozi Nwaefulu, John Ihechukwu Nwafor, Daniel Lotanna Ajaghaku, Ngozi Ezinwanne Amuchie, Blessing Akporotu
Investigating Genetic Vulnerability to Environmental Exposures and Associated Lung Diseases: A Bioinformatics Study
Lung diseases induced by environmental exposures such as air pollution, cigarette smoke, and industrial particles remain a significant global health concern, contributing to high morbidity and mortality rates. Genetic variations are known to influence individual responses to environmental exposures, but the molecular mechanisms underlying these interactions are not well understood. This study aims to identify genetic variants, specifically Single Nucleotide Polymorphisms (SNPs), that may increase the risk of lung diseases using a bioinformatics approach. The analysis was conducted by integrating various public genetic databases, including PheWAS, GWAS Catalog, HaploReg v4.2, GTEx Portal, and Ensembl Genome Browser. SNPs were filtered based on p-value < 0.05 and odds ratio (OR) > 1. Missense mutations in selected SNPs were further analyzed for gene expression in lung tissue and distribution across populations. From an initial 151 SNPs, 86 met the statistical criteria, and six were identified as missense variants. Two genes, TNIP1 and PSMB8, showed significantly high expression in lung tissue. SNP rs2071543 in PSMB8 exhibited a strong correlation with increased gene expression and demonstrated notable allele frequency variation across populations. These findings suggest that genetic variations, particularly in PSMB8, may contribute to individual susceptibility to lung diseases induced by environmental exposures. This study highlights the importance of multidatabase analysis in identifying genetic biomarkers and provides a foundation for the development of precision therapies for multifactorial lung diseases.
Copyright (c) 2025 Muhammad Farid, Ardestya Rastrani, Shaldhan Bayu Yuska
Sensitive and Selective Chromatographic Method to Determine Vanadium in Commercial Phosphoric Acid
The spectrophotometric method adopting N-Benzoyl-N-phenylhydroxylamine was exechted for ascertaining vanadium in environmental samples. high performance liquid chromatography (HPLC) system equipped with a C18 RP column was used to determine vanadium in wet phosphoric acid and phosphate samples. A rapid pre-column response of vanadium with 5-Br-PADAP was used without prior separation or adding any masking agents. The results showed that, the chelates were detected after being injected through the column by UV- Vis detector at wavelength 585 nm. The molar absorptivity is 5.5 x104 and the retention time is 6.3 minutes. The sensitivity of this reagent is equal to twice as high as the use of (PAR) reagent. The RSD was 1.7% for weak concentrations to 0.22% for high concentrations and the relative error (RE) was between 3.21% and 1.07%. In conclusion the method of the currently study was found highly sensitive and selective and the results show a good accuracy and precision.
Copyright (c) 2025 Hassan Pyar, Abdul Rahman Wahoud
The Antivirulence Mechanisms of Phytate Against Pathogenic Bacteria in Skin Infections
Skin infections caused by the bacteria Staphylococcus aureus, Streptococcus pyogenes, and Propionibacterium acnes are often a common health problem. One treatment is antibiotics, but the cases of antibiotic resistance are increasing. Thus, new treatment alternatives are needed. This study aimed to analyze the molecular mechanism of phytate antivirulence against pathogenic bacteria of skin infection. This study used a bioinformatics approach involving analysis of phytate interactions with bacterial virulent proteins via STITCH, functional classification of proteins with VICMpred, and prediction of virulence properties using VirulentPred. B-cell and MHC epitopes were analyzed using IEDB, while protein subcellular location was determined through PSORTb. The results showed that phytate interacted specifically with virulent proteins in all three bacteria, most of which functioned in cellular and metabolic processes. These virulent proteins also have immunologically relevant epitopes. Subcellular location analysis showed that phytate protein targets were dispersed in the cytoplasmic membrane and cytoplasm. These findings indicated that phytate has a significant antivirulence mechanism by targeting virulent proteins of skin pathogenic bacteria, thus potentially becoming a therapeutic agent to treat skin infections while reducing antibiotic resistance.
Copyright (c) 2025 Nabilatul Zhofiroh, Rian Ka Praja, Elsa Trinovita, Ysrafil Ysrafil, Ranintha BR Surbakti
Nigella Sativa Oil Protects Against Aluminium Chloride-Induced Cognitive Impairment Via Modulation of Cholinergic Activity, Brain Neurotransmitter, and Oxidative Stress
Alzheimer’s disease (AD) is a progressive neurodegenerative disorder characterized by cognitive decline and memory impairment, with no known cure. This study investigated the potential protective effects of Nigella sativa oil (NSO) on aluminium chloride-induced cognitive impairment in Wistar rats. Twenty-four rats were divided into four groups. Group I received 1 ml/kg of distilled water. Groups II-IV were administered aluminium chloride (100 mg/kg). Groups III and IV were co-treated with NSO at 1 ml/kg and 2 ml/kg, respectively. Neurobehavioral assessments (Morris water maze and Y-maze) were performed, followed by biochemical analysis of brain tissues. Aluminium chloride significantly (p < 0.05) impaired spatial learning and memory and decreased the percentage of alternation. It also significantly (p < 0.05) increased acetylcholinesterase level, glutamate concentration, and malondialdehyde level, and decreased antioxidant markers. Meanwhile, Nigella sativa oil (1 ml/kg and 2 ml/kg) significantly (p < 0.05) improved learning ability and spatial memory, and increased percentage alternation in the Y-maze test. Nigella sativa oil also significantly (p < 0.05) decreases acetylcholinesterase, glutamate, and malondialdehyde, and increases antioxidant biomarkers. This study showed that Nigella sativa oil can improve cognitive and spatial learning functions via modulation of cholinergic activity, brain neurotransmitters, and oxidative stress.
Copyright (c) 2025 Ayodeji Oluwatobi Ojetunde, Abdulwahab Alhassan, Ibrahim Suleiman, Ahmed Sherif Isa
Extracellular Metabolites of Clove-Endophytic Bacteria, Niallia nealsonii DCL1, Exhibit Potential Cellular Antioxidant and Antiaging Activities
The clove plant, Syzygium aromaticum L., is a highly valued spice in Indonesia, recognized for its extensive applications in food preservation and medicinal uses. In a prior study, six endophytic bacteria were successfully isolated from clove leaves. One of these isolates, designated as DCL1, is a Gram-positive bacterium identified as Niallia nealsonii. This study aimed to determine the antioxidant and antiaging properties of the extracellular metabolite of DCL1. Extracellular metabolites were extracted with ethyl acetate and evaluated for antioxidant activity via the DPPH assay. Total phenolic and flavonoid compounds were also quantified with further metabolilte profiling using Liquid Chromatography Tandem-Mass Spectrometry (LC-MS/MS) analysis. Further study of antiaging activity was assayed using yeast model Schizosacchromyces pombe. The extract from N. nealsonii DCL1 cultures harvested at 28 and 40 hours yielded 0.01% and 0.009%, respectively. Our findings indicate that the 40-hour extract contains higher levels of phenolics (93.54 mg gallic acid equivalents/g extract) and flavonoids (12.09 mg quercetin equivalents/g extract) compared to the 28-hour extract. Additionally, the 40-hour extract exhibited greater antioxidant activity than the 28-hour extract, as demonstrated by DPPH (IC50 222 µg/mL) and ABTS (IC50 511.43 µg/mL) assays. Moreover, the 40-hour extract significantly prolonged the viability of S. pombe, suggesting its potential as an anti-aging agent. LC-MS/MS analysis identified several potential bioactive compounds, including gallic acid and N-carbamoyl-2,3-dihydroxybenzamide, which may contribute to its bioactivity. Ultimately, our study indicates that DCL1 40-h extract showed antiaging potential, which is promising as source and formulation of biopharmaceutical or cosmeceutical products.
Copyright (c) 2025 Nadiyah Salsabilah, Muhammad Eka Prastya, Rika Indri Astuti
Detection of Escherichia coli Contamination Using Most Probable Number (MPN) Methods of Jamu Pahitan in Singaparna District, Tasikmalaya
Indonesians consume a lot of traditional jamu, including jamu pahitan. However, the hygiene aspect in the production and serving process is often neglected, so it has the potential to be contaminated with Escherichia coli. Using the MPN method, this study analyzed the presence of E. coli in jamu pahitan sold in Singaparna District. A total of 10 samples were tested, taken from jamu vendors who used plastic bottle packaging. The MPN test results showed that all samples contained E. coli with MPN values ranging from 6.0-1100 g/mL. None of the samples met food safety standards based on SNI 7388:2009, because the maximum limit of E. coli in drinks is <3 MPN/mL. The results of Gram staining of bacteria showed that the bacteria found were bacilli, red in color, including Gram-negative bacteria, indicating the presence of E. coli bacteria.
Copyright (c) 2025 Syifa Sri Rahmawati, Richa Mardianingrum, Susanti Susanti
Anatomical Structure of Young Oil Palm (Elaeis guineensis Jacq.) Leaves for Callogenesis Initiation
Plant anatomy, a key area within biology, examines the structure and organization of plant organs and tissues. It underpins various disciplines such as physiology, ecology, taxonomy, and evolutionary biology. Anatomical data are typically obtained using the paraffin embedding, which facilitates detailed microscopic observations. In oil palm (Elaies guineensis Jacq.) tissue culture, young leaves are commonly used as explants in callogenesis inducing undifferentiated cell growth. The study aimed to describe anatomical characteristics of young oil palm leaves, analyze the correlation between anatomical traits across different leaf positions, and examine anatomical changes during callogenesis. Leaf samples were collected from positions -4, -5, -6, -7 and -8, processed using paraffin embedding technique, and analyzed microscopically. The percentages of callogenesis were also calculated for each leaf position. Data were analyzed using ANOVA, followed by Duncan’s Multiple Range Test (DMRT), and correlation analysis was performed in R Studio. The anatomical features included the adaxial and abaxial epidermis, cuticle, hypodermis, mesophyll (palisade and spongy parenchyma), vascular bundles (phloem and xylem), stomata, and sclerencyma. The correlations between mesophyll and leaf thickness were very strong (r= 0.97, p>0.05), indicating that as mesophyll tissue thickness increases, the overall leaf thickness also increases. Notably, leaves at position -8 exhibited the highest rate callogenesis, reaching 204%.
Copyright (c) 2025 Muhammad Ilham, Ernayunita
The Effect of Torch Ginger (Etlingera elatior) Flower Extract on Creatinine Levels and Kidney Histophatology in Alloxan-Induced White Rats (Rattus norvegicus)
Kidney function impairment is a common complication of hyperglycemia, characterized by increased creatinine levels and structural damage to renal tissue. Alloxan is frequently used to induce kidney injury through oxidative stress mechanisms. Torch ginger (Etlingera elatior) flower contains antioxidant compounds with potential nephroprotective effects. This study aims to determine the effect of torch ginger (Etlingera elatior) flower extract on creatinine levels and kidney histopathology in alloxan-induced white rats (Rattus norvegicus). The study used a Completely Randomized Design (CRD) with an experimental approach. The negative control group received destilled water, while the positive control group was induced with alloxan (120 mg/kgBW) intraperitoneally and treated with glibenclamide (0.45 mg/kgBW). The treatments groups (P1, P2, and P3) were given alloxan (120 mg/kgBW) and torch ginger (Etlingera elatior) flower extract orally at doses of 100 mg/kgBW, 200 mg/kgBW, and 400 mg/kgBW, respectively. This study showed that torch ginger (Etlingera elatior) flower extract significantly reduced creatinine levels and improved kidney histopathology (renal tubular necrosis). The 400 mg/kgBW dose was the most effective in lowering creatinine levels and repairing kidney tissue damage.
Copyright (c) 2025 Nofri Megariang Hura, Erlintan Sinaga
Antioxidant Activity Test of Bride's Tears (Antigonon leptopus) Leaves Using the DPPH Method
Bridal tear leaves can be used to treat various health and beauty problems because they contain various active compounds, such as flavonoids, saponins, and tannins. These compounds have antioxidant, anti-inflammatory, and antibacterial properties. This flower contains antioxidants that can help protect the skin from damage caused by free radicals. This research aims to see the effectiveness of antioxidants from bridal tear leaves. The research method involves leaf extraction using 96% ethanol and testing antioxidant activity using the DPPH method. The research results showed that the extract sample from bride's tear leaves was (IC50 – 69.7146 ug/mL). This shows that the bride's tear leaf extract is quite strong in inhibiting free radical reactions.
Copyright (c) 2025 Nailil Wafiq Azizah, Majida Ramadhan*, Faisal, Devana Rahma Aldina, Ramadina Novia Putri, Nur Laila Anggraini, Sabilatul Mufarrohah, Satria Gemilang, Firadika Fitriansyah, Hosiyah, Nuvia Harini Wulan Suci, Nihlatus Sofiya, Terra Januarista, Ramizard Rafsa
Optimization of Genomic DNA Extraction Method on Nutmeg (Myristica fragrans Houtt.)
Nutmeg (Myristica fragrans) is one of the commodities in the Myristicaceae family that has numerous benefits and has high phenolic compounds. Elevated amounts of secondary metabolites in the Myristica genus pose significant challenges for obtaining high-quality DNA. This complexity often results in reduced DNA recovery and suboptimal absorbance ratios, attributed to contamination by RNA and proteins in DNA extraction yields.. The results of DNA extraction that have been obtained through several variations of optimized methods are compared. The DNA extraction method using a modified Geneaid Genomic DNA Mini Kit was determined to produce the highest quality and quantity of DNA. Compared to other protocols such as Doyle and Doyle, modified Doyle and Doyle, and the basic protocol of the Geneaid kit without improvement, the modified Geneaid Genomic DNA Mini Kit had a high mean range purity of 1.83, and bands appeared.
Copyright (c) 2025 Tanti Agustina, Abdul Razaq Chasani
Antioxidant and Antibacterial Potential of Water Extracts of Selected Plant Species from Tuzla Region (Bosnia and Herzegovina)
This study aims to determine the antioxidant and antibacterial potential of aqueous extracts of six different plant species, which are widely used in traditional medicine: Salvia officinalis L., Mentha longifolia (L.) Huds., Urtica dioica L., Rosmarinus officinalis L., Rubus fruticosus L. and Achillea millefolium L. The samples were collected in the Tuzla region between March and July 2025. All of the mentioned plants are important in traditional medicine and have been previously reported to have biological activity. The antioxidant activity was tested by the DPPH and FRAP methods, while the antibacterial potential was tested by the diffusion technique on reference bacterial strains from the WDCM collection. The extracts showed high antioxidant activity, with nettle and sage extracts showing the most potent in neutralizing DPPH radicals. Weak to moderate antibacterial activity was recorded in the case of nettle, sage, mint and rosemary extracts, and a complete absence of activity in the case of yarrow and blackberry leaf extracts.
Copyright (c) 2025 Lejla Mekic, Edina Huseinovic, Jasmina Dedic, Darja Husejnagic, Emir Horozic
Isolation and Identification of Dermatophytes from Toenails and Interdigital Spaces of Students Using Czapek Yeast Extract Agar
Dermatophytosis remains a common superficial fungal infection affecting nails and interdigital spaces, with Trichophyton rubrum and T. mentagrophytes as the predominant etiologic agents. The recent emergence of terbinafine-resistant T. indotineae has raised new challenges in diagnosis and treatment. Although Sabouraud Dextrose Agar is the conventional medium for fungal culture, alternative media such as Czapek Yeast Extract Agar (CYA) may provide additional advantages for dermatophyte isolation and morphological identification. This study aimed to isolate and identify dermatophytes from toenails and interdigital spaces of university students using CYA medium and to evaluate its applicability in dermatophyte culture. A cross-sectional descriptive study was conducted among 100 university students aged 18–24 years. Specimens were collected from toenails (n = 60) and interdigital spaces (n = 40). Direct microscopy was performed using 20% KOH preparation. Samples were cultured on CYA supplemented with chloramphenicol and cycloheximide, and incubated at 28 ± 2 °C for up to 21 days. Fungal isolates were identified based on macroscopic and microscopic morphology. Data were analyzed descriptively, and associations were tested using the chi-square test. Fungal elements were detected in 65% of samples by KOH examination, and dermatophyte growth was confirmed in 52% of cultures. The most frequently isolated species were T. rubrum (28%) and T. mentagrophytes (18%). Notably, T. indotineae was detected in 5% of samples. No significant difference was found between toenail and interdigital isolates (p = 0.26). Dermatophytes are prevalent among university students, with T. rubrum as the dominant species. The detection of T. indotineae highlights its emerging role in young populations. CYA proved effective for dermatophyte isolation and may serve as an alternative culture medium in academic and diagnostic laboratories.
Copyright (c) 2025 Lisa Savitri, Kharisul Ihsan, Rochmad Krissanjaya, Elfred Rinaldo Kasimo, Novirma Yanti, Mochamad Hanif Hilmi
Assessment of Knowledge, Attitude and Practice Towards Infection Prevention and Control Among Health Staff at Seiyun General Hospital Authority
Healthcare workers (HCWs) are continuously exposed to pathogenic microorganisms, which can lead to serious infections. Infection prevention and control (IPC) relies heavily on HCWs’ knowledge, attitudes, and practices (KAP). This study aimed to assess KAP towards IPC among health staff at Seiyun General Hospital Authority, Yemen, during 2023–2024. A cross-sectional study was conducted involving 106 participants. Data were collected through a self-administered questionnaire and analyzed using SPSS software. Among participants, 60.6% held a diploma, 62.5% were male, 37.5% were nurses, and 33.7% had 1–5 years of experience. Regarding knowledge, 91.3% reported understanding IPC, and 76.9% acknowledged the role of sterilization. In terms of attitude, 60% strongly agreed that handwashing reduces infections. As for practices, 90.4% washed their hands before patient care, and 76% educated patients about IPC. Significant associations were found between KAP levels and education, age, gender, job category, and experience. Occupational category and work experience influenced KAP levels, while education, age, and gender showed limited impact.
Copyright (c) 2025 Sarah O. Alsawmhi, Anwar S. Alhussan, Hassan Pyar, Taher I. Bin Sumait
The Potential of Lime Juice in Reducing Fe Levels and Improving the Quality of Clove Leaf Oil Using Complexometry and Testing Its Antioxidant Activity Using DPPH (1,1-Diphenyl-2-picrylhydrazil)
Clove leaf oil from Samigaluh, Kulon Progo has high Fe content and low eugenol content due to an ineffective distillation process. This study aims to analyze the ability of lime juice as a purifying agent in reducing iron content through complexometry, varying the concentration of lime juice (2%, 3%, and 4%) and stirring time (30, 60, and 90 minutes) on 50 mL of clove leaf oil mixed with 50 mL of lime juice. Eugenol isolation was performed using KOH-H2SO4 extraction. Testing was also conducted on eugenol content, acid number, refractive index, specific gravity, and antioxidant activity using DPPH. Sample testing was performed using AAS, GC, and UV-Vis spectrophotometry. Optimal conditions were obtained at a lime juice concentration of 4% with 60 minutes of stirring, which successfully reduced Fe content from 17.6 to 1.7 mg/kg, increased eugenol content from 75.908% to 78.730% at a lime juice concentration of 3% and 90 minutes of stirring, reducing the acid number from 1.82 to 0.94 mg NaOH/g, increasing the refractive index from 1.331 to 1.529, and increasing the specific gravity from 1.020 to 1.036. Further redistillation with KOH and H2SO4 increased the purity of eugenol to 96.476% with strong antioxidant activity (IC50 57.45 ppm).
Copyright (c) 2025 Teti Wulandari, Susy Yunita Prabawati
Predicting the Anti-Pulmonary Fibrosis Potential of Physalis angulata Compounds A Computational Study
Pulmonary fibrosis is a progressive lung disease characterized by tissue scarring and respiratory decline. Existing treatments have limited efficacy and significant side effects. Physalis angulata, a traditional medicinal plant, shows promise for antifibrotic therapy due to its bioactive compounds potentially targeting key fibrotic pathways. This study aims to predict the potential of Physalis angulata compounds to PI3K/AKT protein as candidates for antifibrotic therapy. Ten active compounds from P. angulata were docked against the PI3K/AKT protein (PDB ID: 2UZT) using AutoDock Vina. Docking was validated by redocking the native ligand. Binding affinities and molecular interactions were analyzed. ADMET properties were predicted via the pkCSM platform to assess pharmacokinetics and toxicity. Myricetrin exhibited the strongest binding affinity (-9.6 kcal/mol), surpassing the native ligand (-9.1 kcal/mol). Other flavonoids, including eriodictyol (-8.9 kcal/mol), naringin (-8.8 kcal/mol), and apigenin (-8.5 kcal/mol), also showed favorable affinities. Critical amino acids involved were Asp184 and Glu121. The redocking RMSD value of 0.893 Ã confirmed methodological accuracy. ADMET predictions revealed high intestinal absorption for tangeretin and apigenin, with no mutagenic or hepatotoxic risks, indicating good pharmacokinetic profiles. Physalis angulata flavonoids exhibit strong PI3K/AKT binding and favorable pharmacokinetics, supporting their potential as antifibrotic agents.
Copyright (c) 2025 Muhammad Farid, Assa Aulia Kirana, Nandita Diah Oktaviana, Sofia Rasyda, Dwi Anggraini, Widya Aryana Ramadhania
Isolation, Morphological Characterization, Biochemistry, and Antagonistic Activity of Endophytic Bacteria from Rice Against Xanthomonas oryzae pv. Oryzae
Endophytic bacteria have the potential as environmentally friendly biocontrol agents in controlling bacterial leaf blight (BLB) in rice caused by Xanthomonas oryzae pv. oryzae (Xoo). This study aims to isolate, characterize morphology and biochemical tests, and test the antagonistic activity of endophytic bacteria from rice against Xoo. Isolation was carried out from healthy rice root tissue using a surface sterilization method. Morphological characterization included colony shape, color, edge, elevation, and Gram properties, while biochemical characterization included catalase, oxidase, motility, starch hydrolysis, and sugar fermentation tests. The antagonistic test used a dual culture assay method on NA (nutrient agar) media. The isolation results obtained six endophytic bacterial isolates (BETP 01–06) identified as the genus Pseudomonas and Bacillus with varying colony morphological characters. Antimicrobial activity test showed two potential isolates, BETP 03 (Pseudomonas) and BETP 05 (Bacillus), with an average inhibitory diameter of 16.3 mm and 16.5 mm against Xoo, respectively. Biochemical characterization showed that BETP 03 was bacillus, Gram-negative, citrate-negative, motile, gelatin hydrolysis positive, starch hydrolysis positive, and catalase positive; while BETP 05 was bacillus, Gram-positive, citrate-positive, motile, gelatin hydrolysis negative, starch hydrolysis positive, and catalase positive. These results indicate that both isolates have high potential as biological biocontrol agents in controlling bacterial leaf blight disease in rice.
Copyright (c) 2025 Saipul Sihotang, Alfons Dwi Putra Butar-Butar, Lita Nasution, Haliatur Rahma, Trizelia, Magdalena Saragih, Retna Astuti Kuswardani, Ika Listiana, Beatrix Sofranes Napitupulu
Analysis of Nutritional Composition and Antioxidant Activity of Yogurt Enriched with Butterfly Pea (Clitoria ternatea L.) Extract
The growing demand for functional foods has encouraged the development of dairy products enriched with natural bioactive ingredients to improve nutritional value and health benefits. This study aimed to analyze the nutritional composition and antioxidant activity of yogurt enriched with butterfly pea (Clitoria ternatea L.) extract. Yogurt was prepared from fresh goat milk with varying concentrations of butterfly pea extract and evaluated for protein, fat, carbohydrate, moisture, ash, vitamin C contents, antioxidant activity, and sensory acceptance. Proximate analysis, UV–Vis spectrophotometry, and the DPPH method were used for chemical determinations, while a hedonic test assessed color, taste, aroma, and texture. Results showed that increasing butterfly pea extract significantly decreased protein and fat contents but increased vitamin C and antioxidant activity, with the highest values observed in yogurt containing 60% extract and 4% formulation (N60K2). Moisture and ash contents were not significantly affected. Sensory evaluation indicated that yogurt with 60% extract and 2% formulation (N60K1) was preferred regarding color, taste, aroma, and texture. Considering compliance with the Indonesian National Standard (SNI) and consumer acceptance, N60K1 was the optimal formulation. The findings suggest that butterfly pea extract can enhance the functional properties of yogurt, particularly its antioxidant potential, while maintaining acceptable sensory quality. This provides insights for developing functional dairy products with natural plant-based bioactives.
Copyright (c) 2025 Yulia Windarsih, I Made Budiarsa, Manap Trianto, Akram, Abdul Ashari
DFT Study and ADMET Investigation of Bioactive 2-Phenoxyquinolines
Pharmacologically active quinoline compounds show interesting functionalities. However, there is still a dearth of information on the potential wide applications of the quinoline scaffolds especially when the substituents on the rings or functionalities are modified. In this study 2-phenoxyquinoline-3-carbaldehyde derivatives were synthesized and investigated using DFT to determine the molecular parameters, electronic and chemical reactivity descriptors including their possible application as drug candidates. Geometry optimisations were carried out using Becke three-parameter hybrid functional combined with Lee-Yang-Parr correlation functionals and augmented basis set with added sets of diffuse s- and p-functions: BL3YP /6-311++G(d,p). Drug-likeness scores and bioactivity prediction were carried out using the webserver programs ADMET Sar 2. Our results showed slightly lower energy values in water than in ethanol depicting high reactiveness of the 2-phenoxyquinolines in water especially compounds with fluoro- and methoxy substituted having the lowest Egap of 3.79 eV and 3.381 eV respectively. The methoxy substitution confers higher susceptibility to electron transfer and chemical reactive in aqeous medium. The ionization potential energies were lower in water and ethanol when compared to the other gas states calculated values. The MEP surfaces of all the compounds investigated reveals the ether oxygen atoms and carbonyl groups as necessities for effective antioxidant properties. It is noteworthy that five of the compounds investigated have high activity values above 3.0 octanol–water partition coefficient value indicating an excellent inhibitory activity and strong chemical reactivity. Good oral bioavailability was shown by the compounds depicting their excellent activity as kinase inhibitors, nuclear receptor compounds and enzyme inhibitors. It is noteworthy that cytochromes CYP2C19, CYP2C29, CYP2D6 and CYP3A4 are not inhibited and therefore do not pose potential adverse drug reactions or toxicity. Interestingly, only one compound showed one violation. Consequently, such scaffolds are potential drug candidates.
Copyright (c) 2025 Oluwafemi S. Aina, Mujeeb O. Rofiu, Luqman A. Adams, Oluwole B. Familoni
Optimization of Date Palm Extract (Phoenix dactylifera L.) Based Collagen Powder Beverage Formula with Spices (Tamarind and Cinnamon) Addition Using D-Optimal Mixture Design Method
The trend of collagen-based beauty functional drinks is predicted to increase. However, its use can potentially cause a fishy taste, so it is usually formulated together with fruit or spice extracts. Date fruit has the potential for high bioactive content, but its utilization as a powder drink in Indonesia is still relatively low. Tamarind and cinnamon are also Indonesian spice commodities that are rich in bioactive components and have a strong flavor that can cover the fishy taste of collagen. Thus, this study aimed to obtain the optimal formulation and the effect of the addition of date, tamarind, cinnamon, and hydrolase collagen powder on the physicochemical characteristics of the final product using the Design Expert program D-Optimal Mixture Design Method. The first stage of the research was determining the upper and lower limits of the independent variables and a fixed value. The optimal formula suggested by Design Expert consisted of 50% date powder, 24,91% tamarind powder, 20,09% cinnamon powder, and 5% hydrolase collagen powder with a desirability value of 0,805. The second stage of characterization testing in the form of chemical tests resulted in antioxidant activity (IC50) of 263,25 ± 8,01 ppm and total phenol content of 101,71 ± 9,21 mg GAE / 100 g. Characterization in the form of physical tests resulted in a moisture content of 2,98 ± 0,01%, dissolving time of 20,52 ± 0,72 seconds, bulk density of 0,52 ± 0,14 g/ml, and hygroscopicity of 18,73 ± 0,04%.
Copyright (c) 2025 Raihanurrabb Pawestriaji, Tri Dewanti Widyaningsih
Optimization of Arabica Coffee (Coffea arabica L.) Shoot Cutting Growth Using Plastic Bottle Covers and Goat Urine Treatments
Arabica coffee (Coffea arabica L.) is a high-value commodity, yet its productivity in Indonesia remains low due to suboptimal cultivation techniques. One of the main constraints is the limited availability of quality seedlings, which is influenced by propagation methods. Vegetative propagation through shoot cuttings is widely used, but often constrained by low survival and root formation rates. The application of plastic bottle covers and goat urine has the potential to improve propagation success by creating a favorable microclimate and supplying growth regulators and essential nutrients. This study examined the effects of plastic bottle cover types and goat urine concentrations on the growth of C. arabica shoot cuttings. The experiment was arranged in a 3×3 factorial Completely Randomized Design (CRD), with two factors: plastic bottle cover types (no cover, open-cap cover, and closed cover) and goat urine concentrations (0, 100, and 180 mL/L). Observed parameters included shoot length, shoot number, leaf length, leaf number, root length, root number, and root diameter. Data were analyzed using analysis of variance (ANOVA) followed by Tukey’s Honestly Significant Difference (HSD) test at a 5% significance level. The results showed a significant interaction between cover type and goat urine concentration. Combining a closed cover with 100 mL/L goat urine produced the highest shoot growth, cutting survival rate, and rooting percentage, while optimal root development was obtained with the closed cover and 180 mL/L goat urine. The most effective treatment was the closed cover combined with 100 mL/L goat urine.
Copyright (c) 2025 Safinah, Sri Darmanti, Yulita Nurchayati
Effect of Ciprofloxacin Administration on Gastric Histopathological Changes in Mice
Ciprofloxacin is a fluoroquinolone antibiotic widely used in clinical and veterinary practice. While effective against a broad range of bacterial infections, several studies have reported potential adverse effects on the gastrointestinal tract, particularly the gastric mucosa. This study aimed to evaluate the histopathological changes in the gastric mucosa of mice following ciprofloxacin administration at different doses. A total of 24 male mice were randomly divided into four groups: control, low-dose ciprofloxacin, moderate-dose ciprofloxacin, and high-dose ciprofloxacin. Treatment was administered orally for 14 days. Gastric tissues were collected and examined histologically using hematoxylin-eosin staining. Histopathological analysis revealed dose-dependent mucosal alterations. The control group showed intact gastric architecture, while the low-dose group exhibited mild epithelial erosion. The moderate-dose group presented with mucosal disruption and inflammatory infiltration, and the high-dose group demonstrated severe ulceration, edema, and mucosal thinning. These findings indicate progressive gastric injury with increasing ciprofloxacin exposure. Ciprofloxacin administration induces dose-dependent gastric mucosal injury in mice, consistent with fluoroquinolone-related gastrointestinal toxicity. Caution is warranted in prolonged or high-dose therapy, and further studies are needed to explore the underlying mechanisms and potential gastroprotective interventions.
Protective Effects of L-Carnitine on Growth and Cardiac Function in High-Glucose-Exposed Zebrafish Embryos
Diabetes mellitus is a chronic metabolic disorder, and maternal hyperglycaemia during pregnancy increases the risk of fetal developmental complications. This study aimed to evaluate the protective role of L-carnitine against glucose-induced embryotoxicity in zebrafish (Danio rerio). Fertilized embryos were exposed to 5% glucose with or without L-carnitine supplementation (50 or 100 uM). Developmental outcomes including survival, hatching, malformations, body length, and heart rate were assessed using microscopy and analyzed by ANOVA and Kaplan–Meier survival curves. High glucose significantly reduced survival (hazard ratio = 6.86; p < 0.0001), delayed hatching (median hatching time 84 vs. 60 hpf; HR = 0.17, 95% CI = 0.08–0.39; p < 0.0001), and induced growth retardation and bradycardia (p < 0.0001). L-carnitine did not rescue survival or hatching but partially ameliorated growth impairment (p < 0.05) and restored heart rate in a dose-dependent manner, with 100 uM supplementation approaching control values (p < 0.001). Morphological abnormalities such as yolk sac edema and spinal curvature remained present but less severe with co-treatment. In conclusion, L-carnitine confers partial protective effects on growth and cardiac function under hyperglycaemic stress, although it does not prevent early lethality.
Copyright (c) 2025 Editya Fukata, Anditri Weningtyas, Lintang Widya Sishartami, Nuramaliah Desliani Putri, Putri Kusuma C. G. R. Asfandi
Prospects of Dwarf Coconut (Cocos nucifera L. var. genjah) as a Cultivar for Coconut Sugar Production in East Lampung
Coconut sugar is emerging as a promising natural sweetener to reduce Indonesia’s dependency on imported refined sugar. Among various coconut cultivars, Cocos nucifera L. var. genjah (dwarf coconut) offers advantages for sap production due to its short trunk, early maturity, and high sugar content. This study aimed to examine the prospects of dwarf coconut as a productive cultivar for coconut sugar development in East Lampung Regency, based on field-level adoption indicators. A total of 41 respondents were selected using Slovin’s formula. Primary data were collected through structured interviews and analyzed using descriptive statistics, T-tests, and multiple linear regression with SPSS version 27. The findings show that factors such as landholding size, formal education exposure, and income levels significantly (P < 0.05) influence the practical use of dwarf coconut for coconut sugar production. These results highlight the potential of dwarf coconut as a strategic cultivar to support local coconut sugar initiatives in Indonesia.
Copyright (c) 2025 Lukman Efendi, Analianasari, Surfiana
Isolation, Identification, and Evaluation of Antimicrobial of the LAB from Bekasam: The Traditional Fermented Fish in Indonesia
Lactic acid bacteria (LAB) are frequently utilized in fermented foods and can incresed shelf life for the products through their secondary metabolites includes carbon dioxide, hydrogen peroxide, lactic acid and bacteriocins. Beside increasing the shelf life, LAB also affect taste, smelt, and texture. Thus, this study aimed to isolate, identify and evaluate antibacterial LAB strains from Indonesian traditional fermented fish (Bekasam). Gram staining, the catalase assay, and motility assays were used to initially characterize the presumed isolates phenotypically following primary isolation on De Man, Rogosa, and Sharper (MRS) agar. 14 isloates were determined to be presumed LAB by preliminary phenotypic testing. One species that has the highest antibacterial activity is confirmed by a 16S rRNA sequencing study. Lactobacillus plantarum CP-134 was identified from the bekasam. In the biochemical characterization all isolates were catalase-negative and non-motile. According to our research, these LAB strains may have applications in fermented foods due to their probiotic properties, which include antibacterial activity. They might be used as natural substitutes for additives and antibiotics, but more in vivo or in silico research is required to verify their potential and effectiveness. A typical traditional food preservation technique for enhancing shelf life, food safety and nutrition and sensory qualities is fermentation. Bekasam is a traditional fermented food from Indonesia.
Copyright (c) 2025 Nur Rohman, Muhammad Bachrun Alim
Synthesis, Characterization, and Micellar Behavior of Amphiphilic Chitosan Bearing Sulfate and Anisaldehyde Imine Groups
Amphiphilic chitosan derivatives bearing sulfate and anisaldehyde imine (anisimine) groups were successfully synthesized and characterized for potential applications as functional biomaterials. The synthesis involved two key steps: (1) sulfation of chitosan using chlorosulfonic acid to introduce O-sulfate groups, and (2) Schiff base formation via reaction with p-anisaldehyde to generate N-anisimine functionalities. Structural modifications were confirmed by Fourier-transform infrared (FTIR) spectroscopy, which showed characteristic absorption bands at ~1250 cm-¹ and ~820 cm-¹ corresponding to O=S=O stretching of sulfate, and a C=N stretch at ~1640 cm-¹ indicating imine formation. Proton nuclear magnetic resonance (1H-NMR) spectra further verified the successful attachment of aromatic protons from p-anisaldehyde and the disappearance of primary amine peaks, confirming imination. The amphiphilic behavior and micelle-forming ability of the N-anisimine-O-sulfated (NAOS) chitosan were evaluated using pyrene as a hydrophobic fluorescent probe for determining the critical micelle concentration (CMC), which was found to be 0.012 mg/mL. The observed low CMC value indicates strong self-assembly capability in aqueous media. These results suggest that NAOS chitosan possesses promising structural and surface-active properties suitable for advanced applications in drug delivery and cosmetic formulations.
Copyright (c) 2025 Herayati, Deana Wahyuningrum, Damar Nurwahyu Bima, Indah Puspita Sari
Formulation Of Instant Functional Collagen Drink With Date Seeds Coffee (Phoenix dactylifera) And Spices (Ginger, Cinnamon, Cardamom, Clove) Using The D-Optimal Mixture Design Method
The functional food trend has grown rapidly since the Covid-19 pandemic, including products made from natural ingredients like herbal collagen drinks. This research aims to develop an optimal collagen drink formulation by adding date seed coffee with ginger, cinnamon, cardamom, and cloves as antioxidants to optimize collagen function.Optimization was carried out using the Design Expert-13 device with the optimization response of antioxidant activity (mg TE/100g) and water content (%). The results showed that the optimal formulation consisted ofdate seed coffee 35.57%; hydrolyzed collagen 25%; and spice mixture (ginger, cinnamon, cardamom, cloves) of 39.432% with a desirability value of 0.741.The optimal product was then instantiated using the spray drying method and compared with commercial products without instantiation and collagen addition.The optimal product has an IC50 antioxidant activity of 743.86 ppm and total phenols of 187.23 mg GAE/100g), with a water content of 3.35%, hygroscopicity of 7.76%, bulk density of 0.488 g/mL, and a dissolution time of 23.32 seconds. The results of the hedonic test on the optimal sample as a whole from 100 panelists were “rather likeâ€ to “likeâ€ with an average value of 3.17 with the most preferred attributes being the consistency and aroma of spices.
siRNAs targeting icaD Gene of Staphylococcus aureus to Inhibit Biofilm Formation: Structural Analysis and Efficacy
Antibiotic resistance in Staphylococcus aureus infections, especially those involving biofilm formation, is a global health issue. Biofilm protects bacteria from the immune system and antibiotic treatment, making them 10 to 1000 times more resistant. The icaD gene, part of the ica operon, is crucial for biofilm synthesis by enhancing the enzymes responsible for forming the biofilm matrix. The icaD gene sequence of Staphylococcus aureus was obtained from the GenBank NCBI database with the accession code CP140612.1, with a gene sequence length of 306 bp and employed several bioinformatics methods, including siDirect for designing and evaluating effective siRNA sequences to select the most promising candidates. Additionally, siRNA Scales, MaxExpect, Duplex Fold, and siPred were employed to analyze the siRNA sequence length, secondary structure, binding energy, and efficacy predictions of siRNAs targeting the icaD gene. The study found that out of 54 siRNA candidates, siRNA22, siRNA50, and siRNA25 achieved inhibition rates of 93.69%, 92.82%, and 92.52%, respectively. These results bioinformatically demonstrated their potential to suppress the expression of the icaD gene and highlight their promise as siRNA-based antibacterial therapies to combat biofilm-related infections. The designed siRNA computationally shows potential as an innovative therapy to combat biofilm infections caused by Staphylococcus aureus.
Copyright (c) 2025 Dinda Ananda Sulistina, Rian Ka Praja, Margaretha Yayu Indah Anugerahny, Hanasia Hanasia, Ysrafil Ysrafil
Application of Alginate-Based Edible Coating with Beeswax Addition on Minimally Processed Pears (Pyrus bretschneideri Rehd.)
Pears, especially after being cut, tended to experience a decline in quality and damage such as enzymatic browning, moisture loss, and texture changes. The application of alginate-based edible coating with the addition of beeswax was one of the innovations that could be applied to minimally processed pears to slow down the rate of deterioration. This study aimed to determine the effect of beeswax concentration in alginate-based edible coating solutions on the freshness of minimally processed pears and to identify the optimal beeswax concentration using the star method. The study was designed using a Completely Randomized Design (CRD) in a non-factorial arrangement with the addition of beeswax. The treatments consisted of six levels: BK as the control, B0 (alginate), B2 (alginate + 2% beeswax), B4 (alginate + 4% beeswax), B6 (alginate + 6% beeswax), and B8 (alginate + 8% beeswax), each with four replications. The results showed that the addition of beeswax to the alginate-based edible coating had a significant effect on moisture content, weight loss, firmness, total soluble solids, and color. The best treatment for maintaining pear freshness according to the star method was B4 (4% beeswax), which had a moisture content of 85.66%, weight loss of 1.79%, firmness of 874.63 gf, total soluble solids of 11.28 ËšBrix, and a lightness (L) value of 68.30 on day 12 of storage.
Copyright (c) 2025 Maftukh Zaina Luthfiyyah, Novita Herdiana, Esa Ghanim Fadhallah, Fibra Nurainy
The Influence of Strain Type and Female Age on the Receptivity of Female Drosophila melanogaster in Homogamous Crosses
Drosophila melanogaster is a widely used model organism in genetic research due to its short life cycle and the presence of many genes homologous to those found in humans. It plays an important role in studies related to genetic inheritance, gene interaction, sex determination, and developmental genetics. One key aspect of its reproductive biology is female receptivity—the willingness of a female to accept mating—which is influenced by various internal and external factors. External factors include environmental conditions such as temperature and humidity, as well as male courtship signals like wing vibrations and chemical cues. Internal factors are mainly related to the female's sexual maturity and mating status. Generally, female receptivity increases with age after eclosion, reaches a peak, and gradually declines. This study investigates the impact of strain type and female age on receptivity in homogamous crosses of D. melanogaster, using two mutant strains: dp (with a wing mutation) and wa (with an eye color mutation). Receptivity was measured by the presence or absence of F1 offspring following crosses between males and females of the same strain, with females tested at different ages ranging from 10 to 60 hours after eclosion. The results indicate that strain type does not have a significant effect on female receptivity. In contrast, female age plays a clear role: individuals aged 30 years and older were more receptive and more likely to produce offspring. No significant interaction was found between strain type and age. These findings suggest that female receptivity in D. melanogaster is more strongly influenced by sexual maturity (as indicated by age) than by genetic differences between strains.
Copyright (c) 2025 Lisa Savitri, Kharisul Ihsan, Rochmad Krissanjaya, Elfred Rinaldo Kasimo
Antibacterial Activity of Bacteriocin from Pediococcus pentosaceus Against Propionibacterium acnes: Molecular Docking, In Vitro, and 16S rRNA Genetic Identification
This study aimed to evaluate the antibacterial potential of bacteriocin produced by lactic acid bacteria against Propionibacterium acnes through an integrative approach involving molecular docking, in vitro assays, and genetic identification using 16S rRNA sequencing. The target protein PDB 7LBU, representing the cell wall of P. acnes, was docked with Small Bacteriocin obtained from PubChem. The best binding affinity was recorded at –7.5 kcal/mol, indicating a stable interaction, supported by cavity analysis and ligand–protein interaction mapping using PyMOL. The results of the in vitro study, as determined by antibacterial activity testing against P. acnes, showed an average inhibition zone of 20.6 mm. In addition, genetic identification through BLAST confirmed the isolate as Pediococcus pentosaceus strain DSM 20336 with a similarity of 99.64%. These findings indicate that the bacteriocin derived from P. pentosaceus has promising potential as a natural agent in the development of alternative therapies for acne.
Copyright (c) 2025 Adhitya Naufal Pribadhi, Penggalih Mahardika Herlambang, Ellyka Purwaningrum
Evaluation of Forest Honey on the Proliferation and Migration of Dermal Fibroblasts under Hyperglycemic Conditions: An In Vitro Study
This study aims to evaluate the effect of forest honey on fibroblast proliferation and migration under hyperglycemic conditions in vitro. The research method involved culturing primary fibroblasts in high-glucose DMEM (25 mM) and dividing them into five groups: standard control (standard medium), hyperglycemia control (high-glucose medium without treatment), 3% honey, 1.5% honey, and 0.75% honey. Proliferation was assessed by counting live cells (Trypan Blue staining/hemocytometer) at 24, 48, and 72 hours. Migration was measured using a scratch assay (0, 24, 48, 72 hours) and analyzed with ImageJ. The Shapiro–Wilk test was used for normality; data were analyzed with ANOVA followed by LSD or Kruskal–Wallis (p<0.05). Results showed that hyperglycemia decreased proliferation compared to the standard control. Treatment with 1.5% honey and 0.75% honey consistently increased proliferation compared to the hyperglycemic control at all time points (p<0.05), while 3% honey showed a relatively lower increase. The standard control group achieved 100% closure at 72 hours in the migration variable. The honey groups (0.75–3%) showed an increase compared to the hyperglycemic control, but the difference was not significant at 24–48 hours and approached significance at 72 hours (p=0.057). In conclusion, forest honey at a concentration of 1.5% can increase fibroblast proliferation in a hyperglycemic environment. The effect on migration requires confirmation with osmolality controls and more sensitive endpoints. These findings provide a biological basis for developing honey-based diabetic wound care adjuvants focusing on dose optimization and formulation standardization.
Copyright (c) 2025 Januar Rizqi, Denny Agustiningsih, Dwi Aris Agung Nugrahaningsih
The Relationship Between Total IgE, Symptom Duration, VAS Scores, and Danyoung Classification in Allergic Rhinitis
Allergic Rhinitis (AR) is an inflammatory condition of the nasal mucosa triggered by allergies, with total IgE often used as a biomarker to assess disease severity. Objective: To analyze the relationship between total IgE levels, symptom duration, Visual Analog Scale (VAS) scores, and Danyoung Classification in AR patients. Methods: A cross-sectional observational analytical study was conducted on 73 patients at the Allergy-Immunology Clinic of Dr. Saiful Anwar General Hospital. Total IgE levels were measured using the ELISA method, while VAS and nasal mucosa classification were assessed through anamnesis and nasoendoscopy. Results: The study showed68.5% of patients had IgE levels above 100 IU/ml, with an average of 982.97 IU/ml. Although higher IgE levels were often found in AR patients, there was no statistically significant correlation between IgE levels and Danyoung classification (significance value 0.924). The correlation test showed a coefficient of -0.11, indicating a negative correlation, but it was not statistically significant. Conclusion: The nasal mucosa condition in patients with high IgE levels does not always reflect severe inflammation. In addition to IgE levels, external factors such as exposure to pollutants and cigarette smoke also play a role in the condition of the nasal mucosa. Therefore, while high IgE levels often indicate allergic reactions, this study found no significant relationship between IgE levels and AR severity.
Copyright (c) 2025 Ayunita Tri Wirattami, Tanti Agustina
Effect of PEG and CMC on Papaya (Carica papaya L.) Extract Against Aedes aegypti Larvae
Dengue haemorrhagic fever (DHF) cases are still high in America and Asia region, including Indonesia. Eradication of DHF can be done by larvacide. Temephos 1%, chemical larvacide used in Indonesia for decades, can cause environment degradation and allergic reaction in human. Papaya stem extract as biolarvacide contains saponins, tannins, alkaloids, flavonoids, papain and essential oils which have larvicidal activity. It can be applicable in all over the world. This study was conducted to determine the better suspending agent between CMC or PEG of papaya stem extract to kill Aedes aegypti larvae. Objective: To determine the better suspending agent to kill Aedes aegypti larvae. Method: This study was true experimental study in laboratory, used post-test only controlled group design. This study used samples consist of Aedes aegypti instar III-IV larvae. There were seven experimental groups, consist of positive control group, negative control group for CMC, negative control group for PEG, extract concentration of 1.5% with CMC suspending agent, extract concentration of 1.5% with PEG suspending agent, extract concentration of 2% with CMC suspending agent, extract concentration of 2% with PEG suspending agent. Each group was repeated 4 times and counted every 6 hours (6th, 12th, 18th, 24th). Data analysis using the SPSS application ver 23. Probit test used to determine the effectiveness of the larvacide, LC50 and LT50 to determine the concentration and time to kill 50% of Aedes aegypti larvae. It used Kruskal Wallis Test to compare four dependent groups. It used Mann Whitney Test to compare the differences of each group. Result: The study showed that LC50 PEG was 0.033%, LC50 CMC was 0.321%, LT50 (PEG+1.5%) was 20.8 hours, LT50 (PEG+2%) was 30.7 hours, LT50 (CMC+1.5%) was 23.5 hours, LT50 (CMC+2%) was 40.7 hours. Based on the probit test, the LC50 and LT50 results showed that papaya stem methanol extract with PEG suspending agent was more effective than CMC suspending agent, it needed lower concentration and lower time to kill 50% of larvae. Kruskall Wallis Test result p<0.05, so there was significantly difference between groups. Post hoc Mann-Whitney Test result p<0.05 between C(-) PEG group with P1, P2, P3, P4 and between C(-) CMC group with P1, P2, P3, P4, so there was significantly difference between C(-) PEG with each group and C(-) CMC with each group. Conclusion: It can be concluded that papaya stem methanol extract with PEG suspending agent was more effective than CMC suspending agent to kill Aedes aegypti larvae.
Copyright (c) 2025 Rochmadina Suci Bestari, Fidhia Nur Rif'aini, Riandini Aisyah, Listiana Masyita Dewi, Devi Usdiana Rosyidah, Retno Sintowati, Hidayah Karuniawati
Detection of The p53 Gene in Formalin Fixed Tissue Archives by Polymerase Chain Reaction (PCR) Method
Formalin fixed tissue archives are tissue biopsy results stored in formaldehyde fixative solution for a long time. The p53 gene is one of the genes that suppresses tumor occurrence and maintains genomic stability to prevent cell mutation and plays a role in the DNA regulation cycle and controls cell proliferation. Polymerase Chain Reaction (PCR) is a nucleic acid amplification technique used to denature and denature DNA or RNA using polymerase enzymes to detect the presence of the p53 gene in formalin-fixed tissue archival samples. This study aimed to detect the presence of the p53 gene in formalin-fixed tissue samples. This study used a descriptive research method with a random sampling technique conducted in the anatomical pathology laboratory and the National College of Health Sciences molecular biology laboratory. The samples in this study consisted of 10 samples consisting of 2 normal tissues used as controls and 8 formalin-fixed tissue samples. In this study, the p53 gene was detected in all samples, both normal tissue samples and formalin-fixed tissue samples after electrophoresis and visualized according to the target of 666 bp (base pair). The presence of the p53 gene qualitatively from DNA isolates can still be detected, but the gene expression level cannot be known in this study.
Copyright (c) 2025 Anastasia Elma Wijayanti, Fitria Diniah Janah Sayekti
Academic Stress and Blood Glucose Levels: A Correlational Study Among Medical Laboratory Technology Students
Diabetes mellitus is a chronic metabolic disorder characterized by elevated blood glucose levels, often influenced by various physiological and psychological factors. One such factor is stress, particularly academic stress among university students. This study aims to explore the potential correlation between academic stress levels and random blood glucose levels among Medical Laboratory Technology (D.IV) students at Kadiri University. A cross-sectional, quantitative approach was used in this study. A total of 28 eligible students participated. Academic stress levels were assessed using the Perceived Sources of Academic Stress (PSAS) questionnaire, while random blood glucose levels were measured using spectrophotometric methods with glucose GOD FS reagents. Data were analyzed using the Pearson correlation test to determine the relationship between the two variables. The majority of students experienced moderate academic stress (71.43%), while the rest (28.57%) experienced high stress. No students reported low stress levels. Regarding blood glucose, 53.57% of participants had normal levels, and 46.43% had elevated levels. The Pearson correlation coefficient was 0.045 with a p-value of 0.819, indicating no statistically significant relationship between academic stress levels and blood glucose levels. Regression analysis also confirmed that while there was a slight positive trend (suggesting that higher stress may slightly raise glucose levels), the effect was negligible and not statistically significant. This study found no significant correlation between academic stress and random blood glucose levels among Medical Laboratory Technology students. Although stress may contribute to changes in glucose levels through hormonal mechanisms, other factors—such as diet, physical activity, and individual coping strategies—likely play a more substantial role. Interventions focusing on stress management, healthy lifestyle habits, and regular health monitoring are recommended to maintain both psychological well-being and metabolic health in students.
Copyright (c) 2025 Lisa Savitri, Mochamad Hanif Hilmi, Elfred Rinaldo Kasimo, Rochmad Krissanjaya, Kharisul Ihsan
Molecular Identification of Lepidopteran Predators of Coccidae on Coffee Plants (Coffea canephora) in Sigi Regency
This study aimed to identify the species of Lepidopteran predators that prey on soft scale insects (Coccidae) found on coffee plants in Sigi Regency using molecular techniques. DNA was extracted using the modified CTAB method (Doyle & Doyle, 1990). PCR amplification targeted the COI gene using universal primers LCO1490 and HCO2198 with a GeneAmp PCR System 9700. Visualization was done using 1% agarose gel and UV-transilluminator. Sequencing was conducted externally. Data were analyzed using BioEdit 7.2.5, BLAST, BOLD Systems, and MEGA11 software. The DNA sequence of the predator sample showed 97.91% similarity to Autoba rubra based on GenBank and 97.59% in BOLD Systems. Phylogenetic analysis confirmed a close genetic relationship with A. rubra, distinct from Eublemma. Morphological similarities with Eublemma were misleading, highlighting the accuracy of molecular identification. This study is the first to confirm the identity of a Lepidopteran predator of coffee scale insects in Indonesia using molecular techniques, revealing its close relation to Autoba rubra. The results correct previous morphological misidentifications and contribute new data on predator diversity in biological control contexts.
Copyright (c) 2025 I Made Budiarsa, Manap Trianto, Bahana Aditya Adnan
Antioxidant and Anti-inflammatory Properties of Peptide Fractions of Morinda lucida and Alstonia boonei and Protective Effects against Lead-induced Toxicity in Drosophila melanogaster
Morinda lucida and Alstonia boonei are widely used in ethnomedicine for treating and managing various ailments and have been validated for several biological activities. This study investigated the antioxidant and anti-inflammatory properties of partially purified peptide fractions of Morinda lucida (MLP) and Alstonia boonei (ABP) and their protective effect against lead (Pb)-induced toxicity on wild-type Drosophila melanogaster. Peptide fractions were partially purified using solid phase extraction and evaluated for antioxidant activities using 2,2-diphenyl-1-picrylhyhdrazyl (DPPH) radical scavenging activity and ferric reducing antioxidant power (FRAP) assays. Anti-inflammatory activity was assessed via protein denaturation and membrane stabilisation assays. Flies were treated with Pb (10 mM), peptide fractions (50 and 100 µg/10g diet), and co-treatment of Pb plus the fractions. After treatment, homogenized flies were analysed for total thiol (TSH) and non-protein thiol (NPSH) content, glutathione-S-transferase (GST) activity, nitric oxide (NO) (nitrite/nitrate) and hydroperoxide levels. The peptide fractions showed significant in vitro antioxidant and anti-inflammatory properties. Both fractions (50 and 100 µg/10g diet) maintained a balanced redox status of flies. Pb exposure reduced survival rates and increased oxidative stress markers compared to control untreated flies. Co-treatment with MLP and ABP (50 and 100 µg/10g diet) improved antioxidant enzyme activities (GST, NPSH and Total thiol) and accumulation of NO and hydroperoxide in Pb-treated flies. Therefore, the peptide fractions from M. lucida and A. boonei may be sources of bioactive agents with therapeutic potential against oxidative stress and inflammation associated with lead toxicity.
Copyright (c) 2025 Zainab Abiodun Molik, Amos Olalekan Abolaji, Omonike Oluyemisi Ogbole
Antipyretic Activity of Stembark Extract of Mammea africana in Rats
Mammea africana Sabine (Guttiferae), is a tree plant whose parts are variously used locally for the treatment of various diseases such as malaria and fever among others. The stembark extract of M. africana (30 -90 mg/kg) was investigated for antipyretic activity in rats using different experimental models; amphetamine, dinitrophenol and yeast-induced pyrexia. The extract exerted prominent inhibition of pyrexia on amphetamine, dinitrophenol and yeast -induced pyrexia. Inhibition was significant (p<0.05–0.001) from 3 to 5 h post- administration of extract and in a dose-dependent fashion. The antipyretic effects of this plant may in part be mediated through the chemical constituents of the plant. The results of this investigation validate the ethnomedical uses of this plant in the treatment of febrile conditions.
Copyright (c) 2025 Jude E. Okokon, Chinyelu C. Osigwe, John A Udobang, Uwaeme Ugonma Florence
Onychomycosis in Students: An Overview of Nail Care Practices and Personal Hygiene
Onychomycosis is a common nail disorder caused by dermatophytes, yeasts, and non-dermatophyte molds, with increasing prevalence among young adults. Poor nail care and personal hygiene habits are essential predisposing factors that contribute to infection. Despite its clinical relevance, data on onychomycosis in student populations remain limited. A cross-sectional study was conducted among 150 undergraduate students from the Faculty of Health Sciences, aged 18–25 years. Nail specimens were collected from individuals presenting with suspected onychomycosis. Direct microscopy was performed using a 20% potassium hydroxide (KOH) preparation, and samples were cultured on Sabouraud Dextrose Agar supplemented with chloramphenicol and cycloheximide. Fungal isolates were identified based on macroscopic and microscopic characteristics. Sociodemographic data, nail care habits, and hygiene practices were collected through structured questionnaires. Data were analyzed descriptively, and associations were assessed using chi-square tests. Onychomycosis was confirmed in 27 students (18%). Dermatophytes were the most frequent isolates, with Trichophyton rubrum (9%) and T. mentagrophytes (5%) predominating, followed by Candida albicans (3%) and Aspergillus spp. (1%). Risk factors significantly associated with infection included irregular nail trimming (p = 0.01), sharing of nail clippers (p = 0.03), and prolonged use of closed footwear (p = 0.02). No significant associations were observed with gender or age. Onychomycosis is prevalent among university students, with dermatophytes as the leading causative agents. Inadequate nail care and poor hygiene practices play a critical role in the occurrence of diseases. Health education and preventive interventions should be prioritized to reduce infection rates in young adults. Further studies employing molecular methods are recommended to refine species identification and improve epidemiological insights.